Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX334412: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-248020' containing sample 'Clostridium leptum A16 #3'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.4M spots, 484.9M bases, 306Mb downloads

UUID: b81ed93d-2eda-4523-9a06-06b177b9ba3b

Design: Illumina sequencing of Clostridium leptum A16_3 via random selection

Submitted by: Broad Institute (BI)

Study: Human Microbiome Project (HMP) reference genome

PRJNA212661 • SRP028784 • All experiments • All runs

Sample: Generic sample from Clostridium leptum A16_3

SAMN02404852 • SRS211635 • All experiments • All runs

Organism: [Clostridium] leptum A16_3

Library:

Name: Pond-248020

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

gssr_id: 335279.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4DYJO

material_type: DNA:DNA Somatic

product_order: PDO-1171

product_part_number: P-MCV-0001

project: G37084

research_project: RP-208

root_sample_id: SM-3VGDM

sample_id: SM-4DYJO

work_request: 36472

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-07-13 14:18:13.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 1 run, 2.4M spots, 484.9M bases, 306Mb

Run	# of Spots	# of Bases	Size	Published
SRR951568	2,400,695	484.9M	306Mb	2013-08-13

ID:: 469505

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